Solving sparse systems

From Medusa: Coordinate Free Mehless Method implementation
Revision as of 13:09, 16 March 2017 by Jureslak (talk | contribs)

Jump to: navigation, search

There are many methods available for solving sparse systems. We compare some of them here.

Matrix of the discretized PDE.
Figure 1: Matrix of the discretized PDE.

Mathematica has the following methods available (https://reference.wolfram.com/language/ref/LinearSolve.html#DetailsAndOptions)

  • direct: banded, cholesky, multifrontal (direct sparse LU)
  • iterative: Krylov

Matlab has the following methods:

Eigen has the following methods: (https://eigen.tuxfamily.org/dox-devel/group__TopicSparseSystems.html)

  • direct: sparse LU
  • iterative: bicgstab, cg

Solving a simple sparse system $A x = b$ for steady space of heat equation in 1d with $n$ nodes, results in a matrix shown in Figure Figure 1.

The following timings of solvers are given in seconds:

$n = 10^6$ Matlab Mathematica Eigen
Banded 0.16 0.28 0.04
SparseLU / 1.73 0.82
BICGStab / Krylov 0.33 0.39 0.53

Incomplete LU preconditioner was used for BICGStab. Without the preconditioner BICGStab does not converge.