Difference between revisions of "Wiki editing guide"

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== MathJax ==
 
== MathJax ==
 
<nomathjax>User either $ $ or \( \) for inline math and $$ $$ or \[ \] for display style math. You can also use environments, such as align, align*, equation.
 
<nomathjax>User either $ $ or \( \) for inline math and $$ $$ or \[ \] for display style math. You can also use environments, such as align, align*, equation.
Equations within numbered environments may be labeled with \label and referenced with \ref or, better, \eqref.</nomathjax>
+
Equations within numbered environments may be labeled with \label and referenced with \ref or, better, \eqref.
 +
All numbers in text should be in $ $, e.g. $100$ m, $35$ kg.</nomathjax>
  
 
=== New commands ===
 
=== New commands ===
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We have a script that [https://gitlab.com/e62Lab/e62numcodes/blob/master/scripts/backup_wiki_static.sh copies wiki as static pages]. It is located in <code>scripts/</code> folder in our repo.
 
We have a script that [https://gitlab.com/e62Lab/e62numcodes/blob/master/scripts/backup_wiki_static.sh copies wiki as static pages]. It is located in <code>scripts/</code> folder in our repo.
 
It can be run directly or by going into your build folder and running <code>make static_wiki</code>.
 
It can be run directly or by going into your build folder and running <code>make static_wiki</code>.
 +
 +
==References==
 +
How to use multiple use of the same footnote
 +
https://www.mediawiki.org/wiki/Extension:Cite#Multiple_uses_of_the_same_footnote
 +
 +
==Adding figures==
 +
There is a drag&drop option to upload an image. To actually insert it in the article (wanting to refer to it later) use the following example
 +
 +
<syntaxhighlight lang="html" line>
 +
<figure id="fig:my_figure_label">
 +
[[File:name_of_my_figure.png|thumb|upright=2|alt=An alternative text, that appears if the figure cannot be shown|<caption>The caption under the figure</caption>]]
 +
</figure>
 +
</syntaxhighlight>
 +
 +
To make a reference to the image, use the code
 +
<syntaxhighlight lang="html" line>
 +
<xr id="fig:my_figure_label"/>
 +
</syntaxhighlight>
 +
== adding code snippets ==
 +
Copyable C++ code for closed form solution:
 +
<syntaxhighlight lang="c++" line>
 +
std::function<Vec2d(Vec2d)> analytical = [=](const Vec2d& p) {
 +
    double x = p[0], y = p[1], r2 = x*x + y*y, factor = -force / (4.0*M_PI*mu);
 +
    double ux = 2*x*y/r2 + 2*mu/(lam + mu)*std::atan2(y, x);
 +
    double uy = (y*y-x*x)/r2 - (lam + 2*mu)/(lam + mu)*std::log(r2);
 +
    return Vec2d(factor*ux, factor*uy);
 +
};
 +
</syntaxhighlight>
 +
 +
Copyable Matlab code for closed form solution:
 +
<syntaxhighlight lang="matlab" line>
 +
function [ux, uy] = point_contact_analytical(x, y, lam, mu, P)
 +
% Evaluates closed form solution for point contact.
 +
% lam and mu are Lame parameters, P is the point force magnitude
 +
r2 = x.^2 + y.^2; factor = -P / (4.0*pi*mu);
 +
ux = factor*(2*x.*y./r2 + 2*mu/(lam + mu)*atan2(y, x));
 +
uy = factor*((y.^2-x.^2)./r2 - (lam + 2*mu)/(lam + mu)*log(r2));
 +
end
 +
</syntaxhighlight>
 +
 +
=== Wiki backup guide ===
 +
This guide covers two ways to backup this wiki, either as html files, only for viewing, or creating a complete backup of the underlying system.
 +
 +
== Backup as static files ==
 +
This scrapes our wiki for html pages and saves them to ninestein <strong>home/mmachine/mm_wiki_backup/</strong>. The [https://gitlab.com/e62Lab/e62numcodes/blob/master/scripts/backup_wiki_static.sh script] is in our scripts directory.
 +
It can be run with
 +
  make static_wiki
 +
from the usual <code>build/</code> folder.
 +
The script runs for a few minutes and back up the relevant part of the wiki.
 +
 +
== Full mediawiki backup ==
 +
The script for this is located in
 +
/var/www/html/ParallelAndDistributedSystems/MeshlessMachine/full_wiki_backup.sh
 +
and runs weekly as a cron job.
 +
To edit the cron job run
 +
  crontab -e
 +
while logged in as the mmachine user. The backup is copied to ninestein home/mmachine. Last 5 backups are stored, and this number can be changed in the script.
 +
To backup manually, run the script and download the backup from ninestein.

Latest revision as of 16:06, 5 October 2017

MathJax

User either $ $ or \( \) for inline math and $$ $$ or \[ \] for display style math. You can also use environments, such as align, align*, equation. Equations within numbered environments may be labeled with \label and referenced with \ref or, better, \eqref. All numbers in text should be in $ $, e.g. $100$ m, $35$ kg.

New commands

New $\LaTeX$ command for the current document can be defined using \newcommand. Globally, commands can be added as macros in the wiki/MathJax/config/default.js file around line 544.

Defined commands:

  • \N, \Z, \Q, \R, \C for basic sets $\N, \Z, \Q, \R, \C$
  • \T for matrix transpose $A^\T$.
  • \b{x} for bold symbols (including greek letters $\b{\alpha}$.

Static pages

We have a script that copies wiki as static pages. It is located in scripts/ folder in our repo. It can be run directly or by going into your build folder and running make static_wiki.

References

How to use multiple use of the same footnote https://www.mediawiki.org/wiki/Extension:Cite#Multiple_uses_of_the_same_footnote

Adding figures

There is a drag&drop option to upload an image. To actually insert it in the article (wanting to refer to it later) use the following example

1 <figure id="fig:my_figure_label">
2 [[File:name_of_my_figure.png|thumb|upright=2|alt=An alternative text, that appears if the figure cannot be shown|<caption>The caption under the figure</caption>]]
3 </figure>

To make a reference to the image, use the code

1 <xr id="fig:my_figure_label"/>

adding code snippets

Copyable C++ code for closed form solution:

1 std::function<Vec2d(Vec2d)> analytical = [=](const Vec2d& p) {
2     double x = p[0], y = p[1], r2 = x*x + y*y, factor = -force / (4.0*M_PI*mu);
3     double ux = 2*x*y/r2 + 2*mu/(lam + mu)*std::atan2(y, x);
4     double uy = (y*y-x*x)/r2 - (lam + 2*mu)/(lam + mu)*std::log(r2);
5     return Vec2d(factor*ux, factor*uy);
6 };

Copyable Matlab code for closed form solution:

1 function [ux, uy] = point_contact_analytical(x, y, lam, mu, P)
2 % Evaluates closed form solution for point contact.
3 % lam and mu are Lame parameters, P is the point force magnitude
4 r2 = x.^2 + y.^2; factor = -P / (4.0*pi*mu);
5 ux = factor*(2*x.*y./r2 + 2*mu/(lam + mu)*atan2(y, x));
6 uy = factor*((y.^2-x.^2)./r2 - (lam + 2*mu)/(lam + mu)*log(r2));
7 end

Wiki backup guide

This guide covers two ways to backup this wiki, either as html files, only for viewing, or creating a complete backup of the underlying system.

Backup as static files

This scrapes our wiki for html pages and saves them to ninestein home/mmachine/mm_wiki_backup/. The script is in our scripts directory. It can be run with

 make static_wiki

from the usual build/ folder. The script runs for a few minutes and back up the relevant part of the wiki.

Full mediawiki backup

The script for this is located in

/var/www/html/ParallelAndDistributedSystems/MeshlessMachine/full_wiki_backup.sh

and runs weekly as a cron job. To edit the cron job run

 crontab -e

while logged in as the mmachine user. The backup is copied to ninestein home/mmachine. Last 5 backups are stored, and this number can be changed in the script. To backup manually, run the script and download the backup from ninestein.