Difference between revisions of "Computation of shape functions"

From Medusa: Coordinate Free Mehless Method implementation
Jump to: navigation, search
(Linearity and reduction to only computing the shapes of the operator space basis)
(Linearity and reduction to only computing the shapes of the operator space basis)
Line 101: Line 101:
 
Then it is sufficient to compute only shape functions for the basis of that operator space, namely
 
Then it is sufficient to compute only shape functions for the basis of that operator space, namely
 
\[
 
\[
\{\b{\chi}_{\frac{\partial}{\patrial x^\alpha}, p}, 1 \leq |\alpha| \leq k \}, \text{ where } \frac{\partial}{\patrial x^\alpha} = \frac{\partial^|\alpha|}{\patrial x_1^{\alpha_1}\cdots x_d^{\alpha_d}} \text{ and } |\alpha| = \sum_{i=1}^d \alpha_i.
+
\{\b{\chi}_{\frac{\partial}{\partial x^\alpha}, p}, 1 \leq |\alpha| \leq k \}, \text{ where } \frac{\partial}{\partial x^\alpha} = \frac{\partial^|\alpha|}{\partial x_1^{\alpha_1}\cdots x_d^{\alpha_d}} \text{ and } |\alpha| = \sum_{i=1}^d \alpha_i.
 
\]
 
\]
Having the shape functions $\b{\chi}_{\frac{\partial}{\patrial x^\alpha}, p}$ available, we write $\mathcal{L}$ in the above basis in point $p$, $\mathcal{L} = \sum_{1 \leq |\alpha| \leq k} a_\alpha(p) \frac{\partial}{\patrial x^\alpha}$
+
Having the shape functions $\b{\chi}_{\frac{\partial}{\partial x^\alpha}, p}$ available, we write $\mathcal{L}$ in the above basis in point $p$, $\mathcal{L} = \sum_{1 \leq |\alpha| \leq k} a_\alpha(p) \frac{\partial}{\partial x^\alpha}$
 
and evaluate it's shape function as  
 
and evaluate it's shape function as  
 
\[
 
\[
   \b{\chi}_{\mathcal{L}, \vec{p}} = \sum_{1 \leq |\alpha| \leq k}  a_\alpha(p) \b{\chi}_{\frac{\partial}{\patrial x^\alpha}.
+
   \b{\chi}_{\mathcal{L}, \vec{p}} = \sum_{1 \leq |\alpha| \leq k}  a_\alpha(p) \b{\chi}_{\frac{\partial}{\partial x^\alpha}.
 
\]
 
\]
 
This saves us space and gives certain elegance to the implementation.
 
This saves us space and gives certain elegance to the implementation.

Revision as of 08:14, 8 September 2017

Shape functions are funcationals, approximating linear partial differential operators in given points. A shape function $\b{\chi}_{\mathcal{L}, \vec{p}}$ of a linear parial differential operator $\mathcal{L}$ in a point $p$ is such a functional that \[ (\mathcal{L} u)(\vec{p}) \approx \b{\chi}_{\mathcal{L}, \vec{p}} \b{u}, \] where $\b{u}$ is a vector of function values $u(x_i)$ evaluated in the support of $\vec{p}$. For more definitions and their usage see the section on Meshless Local Strong Form Method (MLSM).

Derivation

Let $\mathcal{L}$ be a linear partial differential operator. We wish to approximate $(\mathcal{L}u)(\vec{p})$ using only values of $u$ in support of $p$. To do so, we construct a MLS approximation (see Moving Least Squares (MLS)) and compute the coefficients $\b{\alpha}$, such that $\hat{u}(\vec{p}) = \b{b}(\vec{p})^\T \b{\alpha}$. The coefficients are computed by solving a system $WB \b{\alpha} = W\b{u}$ using the pseudoinverse \[ \b{\alpha} = (WB)^+W\b{u}, \] where $A^+$ denotes the Moore-Penrose pseudoinverse that can be calculated using SVD decomposition. Writing down the approximation function $\hat{u}$ we get \[ \hat u (\vec{p}) = \b{b}(\vec{p})^\T \b{\alpha} = \b{b}(\vec{p})^\T (WB)^+W\b{u} = \b{\chi}_{\vec{p}} \b{u}. \]

We have defined $\b{\chi}$ to be \[ \b{\chi}(\vec{p}) = \b{b}(\vec{p})^\T (WB)^+W. \] Vector $\b{\chi}$ is a row vector, also called a shape function. The name comes from being able to take all the information about shape of the domain and choice of approximation and store it in a single row vector, being able to approximate a function value from given support values $\b{u}$ with a single dot product. For any values $\b{u}$, value $\b{\chi}(p) \b{u}$ gives us the approximation $\hat{u}(\vec{p})$ of $u$ in point $\vec{p}$. Mathematically speaking, $\b{\chi}(\vec{p})$ is a functional, $\b{\chi}(\vec{p})\colon \R^n \to \R$, mapping $n$-tuples of known function values to their approximations in point $\vec{p}$.

The same approach works for any linear operator $\mathcal L$ applied to $u$. We approximate \[ (\mathcal{L}u)(\vec{p}) \approx (\mathcal{L} \hat{u})(p) = (\mathcal{L}\b{b})(\vec{p})^\T \b{\alpha} = (\mathcal{L}\b{b})(\vec{p})^\T (WB)^+W\b{u} = \b{\chi}_{\mathcal{L},\vec{p}} \b{u}. \]

For example, take a $1$-dimensional case for approximation of derivatives with weight equal to $1$ and $n=m=3$, with equally spaced support values at distances $h$. We wish to approximate $u''$ in the middle support point, just by making a weighted sum of the values, something like the finite difference \[ u'' \approx \frac{u_1 - 2u_2 + u_3}{h^2}. \] This is exactly the same formula as we would have come to by computing $\b{\chi}$, except that our approach is a lot more general. But one should think about $\b{\chi}$ as one would about the finite difference scheme, it is a rule, telling us how to compute the derivative. \[ u''(s_2) \approx \underbrace{\begin{bmatrix} \frac{1}{h^2} & \frac{-2}{h^2} & \frac{1}{h^2} \end{bmatrix}}_{\b{\chi}} \begin{bmatrix}u_1 \\ u_2 \\ u_3 \end{bmatrix} \]

The fact that $\b{\chi}$ is independent of the function values $\b{u}$ but depend only on domain geometry means that we can just compute the shape functions $\b{\chi}$ for points of interest and then approximate any linear operator of any function, given its values, very fast, using only a single dot product.

Numerical calculation of the shape functions

The expression \[ \b{\chi}_{\mathcal{L}, \vec{p}} = (\mathcal{L}\b{b})(\vec{p})^\T (WB)^+W \] can be evaluated directly, but this is not the most optimal approach. Numerically cheaper and more stable way is to translate the problem of inverting the matrix to solving a linear system of equations.

Invertible $B$ case: If $B$ is invertible, then $\b{\chi}_{\mathcal{L}, \vec{p}} = (\mathcal{L}\b{b})(\vec{p})^\T B^{-1}$, transposing the equation then multiplying it from the left by $B$, $\b{\chi}_{\mathcal{L}, \vec{p}}$ can be thought as a solution of a system $B^\T\b{\chi}_{\mathcal{L}, \vec{p}}^\T = (\mathcal{L}\b{b})$, which can be solved using LU or Cholesky decomposition for example.

General case: For a system written as $Ax = b$, where $A$ is a $n\times m$ matrix, $x$ is a vector of length $m$ and $b$ a vector of length $n$, a generalized solution is defined as $x$ that minimizes $\|A x - b\|_2^2$. If more $x$ attain the minimal value, $x$ with the minimal $\|x\|$ is chosen. Note that this generalizes the solution a general system ($A$ is invertible) and over-determined system ($n > m$ and $A$ has full rank). Such an $x$ can be computed using the pseudoinverse $x = A^{+} b$.

In our case, let us denote a part of the solution containing the pseudoinverse by $\tilde{\b{\chi}}_{\mathcal{L}, \vec{p}}$. \[ \b{\chi}_{\mathcal{L}, \vec{p}}(\vec{p}) = \underbrace{(\mathcal{L}\b{b})(\vec{p})^\T (WB)^+}_{\tilde{\b{\chi}}_{\mathcal{L}, \vec{p}}} W \] We have an expression $\tilde{\b{\chi}}_{\mathcal{L}, \vec{p}} = (\mathcal{L}\b{b})(\vec{p})^\T (WB)^+$ which after transposition takes the form $\tilde{\b{\chi}}_{\mathcal{L}, \vec{p}}^\T = ((WB)^\T)^+(\mathcal{L}\b{b})(\vec{p})$, the same as $x = A^+b$ above. Therefore, $\tilde{\b{\chi}}_{\mathcal{L}, \vec{p}}^\T$ is the solution of an (indeterminate) system $(WB)^\T \tilde{\b{\chi}}_{\mathcal{L}, \vec{p}}^\T = (\mathcal{L}\b{b})(\vec{p})$. After solving that, we can get the shape function $\b{\chi}_{\mathcal{L}, \vec{p}} = \tilde{\b{\chi}}_{\mathcal{L}, \vec{p}} W$ by multiplying by matrix $W$.

The system before can be solved using any decomposition of matrix $(WB)^\T = B^\T W$, not neceserally the SVD decompostion, but depending on our knowledge of the problem, we can use Cholesky ($B^\T W$ is positive definite), $LDL^\T$ if it is symmetric, $LU$ for a general square matrix, $QR$ for full rank overdetermined system and SVD for a general system. If more shapes need to be calculated using the same matrix $B^\T W$ and only different right hand sides, it can be done efficiently by storing the decomposition of $B^\T W$.


Another view on derivation of shape functions

Solving the system $B^\T\b{\chi}_{\mathcal{L}, \vec{p}}^\T = (\mathcal{L}\b{b})$ (in invertible $B$ case) has more than just algebraic meaning. It can be interpreted as using the method of undetermined coefficients. We wish to find such a combination of function values evaluated in support points that approximates the value of an operator $(\mathcal{L}u)(p)$, ie., we are looking for coefficients $\chi_i$, such that \[ \sum_{i=1}^n \chi_i u_i \approx (\mathcal{L}u)(p). \]

We require that $\chi_i$ be such, that above approximations holds on a certain set of functions, $\{b_j\}_{j=1}^m$ and we write the equations: \[ \begin{bmatrix} b_1(x_1) & \cdots & b_1(x_n) \\ \vdots & \ddots & \vdots \\ b_m(x_1) & \cdots & b_m(x_n) \\ \end{bmatrix} \begin{bmatrix} \chi_1 \\ \vdots \\ \chi_n \end{bmatrix} \begin{bmatrix} (\mathcal{L} b_1)(\vec{p}) \\ \vdots \\ (\mathcal{L} b_m)(\vec{p}) \end{bmatrix} \] The solution os the sought shape function $\b{\chi}$. By choosing the basis functions $b_j$ we decide for which functions the aproximation $\b{\chi}_{\mathcal{L}, \vec{p}} \b{u} \approx (\mathcal{L}u)(p)$ should be exact. If we do not specify enough functions $b_j$, we minimize $\|\b{\chi}_{\mathcal{L}, \vec{p}}\|$ instead.


Linearity and reduction to only computing the shapes of the operator space basis

Observe that the expression for the shape functions \[ \b{\chi}_{\mathcal{L}, \vec{p}} = (\mathcal{L}\b{b})(\vec{p})^\T (WB)^+W \] is linear in $\mathcal{L}$. Say that your equation constitutes of operators up to a certain $k$-th order. Then it is sufficient to compute only shape functions for the basis of that operator space, namely \[ \{\b{\chi}_{\frac{\partial}{\partial x^\alpha}, p}, 1 \leq |\alpha| \leq k \}, \text{ where } \frac{\partial}{\partial x^\alpha} = \frac{\partial^|\alpha|}{\partial x_1^{\alpha_1}\cdots x_d^{\alpha_d}} \text{ and } |\alpha| = \sum_{i=1}^d \alpha_i. \] Having the shape functions $\b{\chi}_{\frac{\partial}{\partial x^\alpha}, p}$ available, we write $\mathcal{L}$ in the above basis in point $p$, $\mathcal{L} = \sum_{1 \leq |\alpha| \leq k} a_\alpha(p) \frac{\partial}{\partial x^\alpha}$ and evaluate it's shape function as \[ \b{\chi}_{\mathcal{L}, \vec{p}} = \sum_{1 \leq |\alpha| \leq k} a_\alpha(p) \b{\chi}_{\frac{\partial}{\partial x^\alpha}. \] This saves us space and gives certain elegance to the implementation.